When can you survey
for protected species?
Survey windows, tree-clearing restriction dates, methods, and the governing agency protocol for 19 commonly surveyed US protected species — filterable by taxon and month, every entry linked to its source.
Important — verify before you mobilize. Survey windows, protocol versions, and tree-clearing restriction dates change frequently and vary by year, region, weather, and the individual agency Field Office with jurisdiction over your project. The dates and methods here are a quick reference compiled from published agency protocols and are not legal or regulatory advice. Before scheduling protocol-level surveys, confirm the current window and methodology with the responsible agency and the governing protocol document — the official agency protocol always governs. Most listed-species protocol surveys also require a valid federal (and/or state) recovery permit. Each entry links to its source; check the source for the authoritative, current requirements.
Showing 19 of 19 species/groups.
Indiana Bat
Myotis sodalisFederally Endangered- Survey window
- Summer survey season: May 15 – Aug 15
- Method
- Mist-net or acoustic (per current Guidelines)
- Agency / protocol
- USFWS — Range-Wide Indiana Bat & Northern Long-Eared Bat Survey Guidelines
- Region
- Eastern & midwestern US (species range)
- Clearance / restriction window
- Tree clearing generally restricted ~Apr 1 – Oct 15 in occupied summer habitat; confirm with the local Field Office
Summer presence/probable-absence window is May 15–Aug 15 for both mist-net and acoustic options. Tree-clearing dates and any post-season survey extensions are set by the local Field Office — confirm.
Northern Long-Eared Bat
Myotis septentrionalisFederally Endangered- Survey window
- Summer survey season: May 15 – Aug 15
- Method
- Mist-net or acoustic (per current Guidelines)
- Agency / protocol
- USFWS — Range-Wide Indiana Bat & NLEB Survey Guidelines
- Region
- Eastern, midwestern & much of the US (species range)
- Clearance / restriction window
- Pup season ~Jun 1 – Jul 31; reclassified to ENDANGERED 3/31/2023 — the former 4(d) tree-clearing exemptions no longer apply
Now federally ENDANGERED (effective Mar 31, 2023); the prior threatened-species 4(d) rule was removed, so the full ESA take prohibition applies. Survey window aligns with the Indiana bat guidelines.
Tricolored Bat
Perimyotis subflavusProposed EndangeredTiming varies — confirm with the local office- Survey window
- Summer survey season: May 15 – Aug 15 (aligned with IBat/NLEB)
- Method
- Mist-net or acoustic
- Agency / protocol
- USFWS — Range-Wide IBat/NLEB Survey Guidelines (tricolored-bat habitat guidance)
- Region
- Eastern & central US (species range)
PROPOSED endangered — verify the current listing status before relying on a determination. Species-specific consultation tools take effect only upon a final listing rule; the survey window is inferred from alignment with the IBat/NLEB guidelines.
Nesting Migratory Birds (general)
Various (MBTA-protected)MBTA / BGEPATiming varies — confirm with the local office- Survey window
- General nesting season ~Mar 15 – Sep 15 (varies by region/species)
- Method
- Pre-construction nest / clearance survey
- Agency / protocol
- USFWS — Migratory Bird Treaty Act — general nesting-season avoidance
- Region
- Nationwide
- Clearance / restriction window
- Avoid vegetation removal ~Mar 15 – Sep 15; if unavoidable, a nest-clearance survey is required
The Mar 15–Sep 15 window is a widely-used regional recommendation, NOT a single federal date. Actual nesting windows shift by latitude, elevation, and species — confirm with the local USFWS Migratory Bird office / state agency.
Nesting Raptors (general)
Various (MBTA-protected)MBTA / BGEPATiming varies — confirm with the local office- Survey window
- Breeding season typically Jan/Feb – Aug (species-specific)
- Method
- Nest-occupancy survey; species-specific buffers
- Agency / protocol
- USFWS / state agencies — MBTA nesting-season avoidance; species-specific raptor buffers
- Region
- Nationwide
Many raptors initiate nesting earlier than passerines (some by Jan/Feb). Buffers and timing windows are species- and state-specific — confirm with the local USFWS office and state wildlife agency.
Golden Eagle
Aquila chrysaetosMBTA / BGEPATiming varies — confirm with the local office- Survey window
- Breeding-season nest occupancy & productivity surveys, ~Jan – Jul
- Method
- Aerial (helicopter preferred) + ground nest surveys; multiple visits
- Agency / protocol
- USFWS — USFWS Region 6 Eagle Nest Survey Protocol (wind) / eagle monitoring guidance
- Region
- Western US (and range)
Survey effort and exact timing depend on project type (wind vs. other) and region; failed nests are monitored at least through ~Apr 1. BGEPA disturbance/take permitting applies. Confirm scope with the local USFWS office.
Coastal California Gnatcatcher
Polioptila californica californicaFederally Threatened- Survey window
- 6 surveys, ≥1 week apart, Mar 15 – Jun 30
- Method
- Protocol pedestrian survey with taped call playback
- Agency / protocol
- USFWS — Coastal California Gnatcatcher Presence/Absence Survey Protocol (1997)
- Region
- Coastal southern California (coastal sage scrub)
Six presence/absence surveys at least one week apart between Mar 15 and Jun 30, in suitable coastal sage scrub. A USFWS recovery permit is required to conduct the protocol.
Least Bell's Vireo
Vireo bellii pusillusFederally Endangered- Survey window
- ≥8 surveys, ≥10 days apart, Apr 10 – Jul 31
- Method
- Protocol riparian pedestrian survey (dawn–~11:00)
- Agency / protocol
- USFWS — Survey Guidelines for the Least Bell's Vireo
- Region
- Southern California / Southwest riparian
At least 8 surveys spaced ≥10 days apart between Apr 10 and Jul 31 in suitable riparian habitat. Requires a USFWS recovery permit.
Southwestern Willow Flycatcher
Empidonax traillii extimusFederally Endangered- Survey window
- 5 surveys / 3 periods: May 15–31, Jun 1–24, Jun 25–Jul 17 (≥5 days apart)
- Method
- Call-playback protocol survey (around dawn)
- Agency / protocol
- USFWS / USGS — Survey Protocol for the Southwestern Willow Flycatcher (USGS TM 2A-10, 2010)
- Region
- Southwestern US riparian (AZ, NM, CA, NV, UT, CO, TX)
Five surveys across three periods (1 in P1, 2 in P2, 2 in P3), each ≥5 days apart. Requires a USFWS recovery permit.
Western Yellow-Billed Cuckoo
Coccyzus americanus (Western DPS)Federally ThreatenedTiming varies — confirm with the local office- Survey window
- ≥4 surveys across survey periods ~Jun 15 – Aug 15
- Method
- Call-playback protocol survey
- Agency / protocol
- USFWS / USGS — Survey Protocol for the Western DPS of the Yellow-Billed Cuckoo (2015)
- Region
- Western US riparian
Minimum four survey visits during the breeding-season survey periods (cuckoos arrive mid-June; nesting late June–late July). Confirm exact period boundaries against the current protocol. Requires a USFWS recovery permit.
Marbled Murrelet
Brachyramphus marmoratusFederally ThreatenedTiming varies — confirm with the local office- Survey window
- Survey season ~Apr 15 – Aug 5 (dawn audio-visual stations)
- Method
- Dawn audio-visual stations; multi-survey, multi-year
- Agency / protocol
- USFWS / Pacific Seabird Group — PSG Inland Survey Protocol (Evans Mack et al. 2003; revised 2024)
- Region
- Pacific NW coastal forests (CA, OR, WA)
Survey 'weeks' run ~Apr 15 through early Aug; surveys start before sunrise. A 2024 revised protocol exists — confirm the number of surveys/years and exact weeks against the current PSG/USFWS version.
Northern Spotted Owl
Strix occidentalis caurinaFederally Threatened- Survey window
- 6 visits/year over 2 years; survey period ~Mar 1 – Aug 31
- Method
- Nighttime/daytime call-back surveys
- Agency / protocol
- USFWS — Protocol for Surveying Activities That May Impact Northern Spotted Owls (2012)
- Region
- Pacific NW (CA, OR, WA)
Two-year, six-visits-per-year protocol; initial visits late March/early April. Barred-owl presence complicates detection — coordinate survey design with USFWS.
Western Burrowing Owl
Athene cunicularia hypugaeaState / Other- Survey window
- Breeding-season: 4 visits; first Feb 15 – Apr 15, then ≥3 visits ≥3 weeks apart
- Method
- Habitat assessment + focused breeding-season surveys
- Agency / protocol
- CDFW (California) — CDFW Staff Report on Burrowing Owl Mitigation (2012)
- Region
- California (and western US; check state protocol)
- Clearance / restriction window
- Breeding season Feb 1 – Aug 31 (75 m buffer); non-breeding Sep 1 – Jan 31 (50 m buffer)
California-specific (CDFW). Burrowing owl is a state Species of Special Concern and MBTA-protected, not federally listed. Other states use their own protocols — confirm locally.
Greater Sage-Grouse
Centrocercus urophasianusState / OtherTiming varies — confirm with the local office- Survey window
- Lek counts: ≥3 counts/lek at ~weekly intervals, ~Mar 15 – Apr 30 (peak ~mid-Apr)
- Method
- Dawn lek counts
- Agency / protocol
- WAFWA / state wildlife agencies — Greater Sage-Grouse Range-Wide Population Monitoring Guidelines (WAFWA)
- Region
- Western US sagebrush (11 states)
Lek-count windows vary by state and elevation (generally Mar 15–Apr 30; peak male attendance ~mid-April). Not federally listed. Each state wildlife agency sets specific dates — confirm locally.
California Red-Legged Frog
Rana draytoniiFederally ThreatenedTiming varies — confirm with the local office- Survey window
- Multiple day + night surveys; timing per USFWS guidance — varies, confirm with FO
- Method
- Day + nighttime visual-encounter surveys; site assessment first
- Agency / protocol
- USFWS — Revised Guidance on Site Assessment and Field Surveys for the California Red-Legged Frog (2005)
- Region
- California (and Baja); coastal & Central Valley
Protocol requires a site assessment, then a set number of day and night surveys (air temp ≥ ~50°F). Exact survey timing is set in coordination with the local USFWS Field Office — confirm. Requires a recovery permit.
Mojave Desert Tortoise
Gopherus agassiziiFederally Threatened- Survey window
- Conduct when tortoises most active: Apr–May or Sep–Oct
- Method
- Pedestrian transect surveys; clearance = 2 perpendicular passes
- Agency / protocol
- USFWS — Pre-Project & Clearance Survey Protocols for the Mojave Desert Tortoise (Rev. 2019)
- Region
- Mojave Desert (CA, NV, AZ, UT west of the Colorado River)
Surveys conducted during peak surface activity (spring Apr–May, fall Sep–Oct). Pre-project and clearance protocols are separate documents — use the correct one. An authorized handler is required for clearance.
Gopher Tortoise
Gopherus polyphemusFederally ThreatenedTiming varies — confirm with the local office- Survey window
- Warm/active season ~Apr – Oct (burrow surveys + scoping)
- Method
- Line-transect distance sampling or 100% burrow survey with burrow-camera scoping
- Agency / protocol
- USFWS / state agencies — Gopher Tortoise Survey Handbook (LTDS); USFWS Burrow Survey Protocol (2025)
- Region
- Southeastern US (FL, GA, AL, SC, MS, LA — western population listed)
The western population is federally threatened; the eastern population's status differs by state. Surveys are best done in warm active months (~Apr–Oct). State relocation permitting (e.g. FWC) has its own rules — confirm with the state agency.
Vernal Pool Fairy/Tadpole Shrimp (large branchiopods)
Branchinecta lynchi, Lepidurus packardi, et al.Federally EndangeredTiming varies — confirm with the local office- Survey window
- One wet-season + one dry-season survey within a 3-year period (follows pool hydrology)
- Method
- Wet-season aquatic dip-net sampling + dry-season cyst/soil sampling
- Agency / protocol
- USFWS — Survey Guidelines for the Listed Large Branchiopods (2017)
- Region
- California & southern Oregon vernal pools
A complete protocol survey is one wet-season + one dry-season survey (or two wet-season) within 3 years; wet-season timing depends on when pools inundate (typically winter–spring rains). Requires a USFWS recovery permit.
Preble's Meadow Jumping Mouse
Zapus hudsonius prebleiFederally ThreatenedTiming varies — confirm with the local office- Survey window
- Live-trapping during active season (~Jun – Sep)
- Method
- Sherman live-trapping, parallel transects
- Agency / protocol
- USFWS — Preble's Meadow Jumping Mouse Survey Guidelines (2004)
- Region
- Colorado Front Range & SE Wyoming riparian
Roughly 400–1,000 trap-nights (≈750 typical) during the active season when the mouse is above ground (it hibernates ~Oct–May). Exact trapping dates are set with the local USFWS office. Requires a recovery permit.
Survey-window FAQ
When can I survey for Indiana bats and northern long-eared bats?
The USFWS Range-Wide Indiana Bat & Northern Long-Eared Bat Survey Guidelines set the summer survey season as May 15–August 15 for both mist-net and acoustic surveys. Tree-clearing restriction windows are set by the local Field Office. Note the northern long-eared bat was reclassified to endangered effective March 31, 2023, removing its former 4(d) exemptions.
What is the general bird nesting season for MBTA compliance?
A widely-used regional rule of thumb is roughly March 15–September 15, but this is not a single federal date — nesting windows shift with latitude, elevation, and species, and many raptors begin earlier (Jan/Feb). Confirm the applicable window with the local USFWS Migratory Bird office or state wildlife agency before clearing vegetation.
When can desert tortoise clearance surveys be done?
USFWS protocols call for conducting Mojave desert tortoise surveys when tortoises are most active above ground — generally spring (April–May) and fall (September–October). Pre-project and clearance surveys are separate protocols, and an authorized handler is required for clearance.
Do survey windows change?
Yes. Survey windows, protocol versions, and tree-clearing dates change frequently and vary by year, region, weather, and the individual agency Field Office. This reference is a quick starting point, not regulatory advice — the official agency protocol always governs, and most listed-species protocol surveys also require a federal and/or state recovery permit.
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