← Wildlife & Ecology Surveys

When can you survey for protected species?

Survey windows, tree-clearing restriction dates, methods, and the governing agency protocol for 19 commonly surveyed US protected species — filterable by taxon and month, every entry linked to its source.

Important — verify before you mobilize. Survey windows, protocol versions, and tree-clearing restriction dates change frequently and vary by year, region, weather, and the individual agency Field Office with jurisdiction over your project. The dates and methods here are a quick reference compiled from published agency protocols and are not legal or regulatory advice. Before scheduling protocol-level surveys, confirm the current window and methodology with the responsible agency and the governing protocol document — the official agency protocol always governs. Most listed-species protocol surveys also require a valid federal (and/or state) recovery permit. Each entry links to its source; check the source for the authoritative, current requirements.

Survey month:

Showing 19 of 19 species/groups.

Indiana Bat

Myotis sodalisFederally Endangered
JFMAMJJASOND
Survey window
Summer survey season: May 15 – Aug 15
Method
Mist-net or acoustic (per current Guidelines)
Agency / protocol
USFWSRange-Wide Indiana Bat & Northern Long-Eared Bat Survey Guidelines
Region
Eastern & midwestern US (species range)
Clearance / restriction window
Tree clearing generally restricted ~Apr 1 – Oct 15 in occupied summer habitat; confirm with the local Field Office

Summer presence/probable-absence window is May 15–Aug 15 for both mist-net and acoustic options. Tree-clearing dates and any post-season survey extensions are set by the local Field Office — confirm.

Northern Long-Eared Bat

Myotis septentrionalisFederally Endangered
JFMAMJJASOND
Survey window
Summer survey season: May 15 – Aug 15
Method
Mist-net or acoustic (per current Guidelines)
Agency / protocol
USFWSRange-Wide Indiana Bat & NLEB Survey Guidelines
Region
Eastern, midwestern & much of the US (species range)
Clearance / restriction window
Pup season ~Jun 1 – Jul 31; reclassified to ENDANGERED 3/31/2023 — the former 4(d) tree-clearing exemptions no longer apply

Now federally ENDANGERED (effective Mar 31, 2023); the prior threatened-species 4(d) rule was removed, so the full ESA take prohibition applies. Survey window aligns with the Indiana bat guidelines.

Tricolored Bat

Perimyotis subflavusProposed EndangeredTiming varies — confirm with the local office
JFMAMJJASOND
Survey window
Summer survey season: May 15 – Aug 15 (aligned with IBat/NLEB)
Method
Mist-net or acoustic
Agency / protocol
USFWSRange-Wide IBat/NLEB Survey Guidelines (tricolored-bat habitat guidance)
Region
Eastern & central US (species range)

PROPOSED endangered — verify the current listing status before relying on a determination. Species-specific consultation tools take effect only upon a final listing rule; the survey window is inferred from alignment with the IBat/NLEB guidelines.

Nesting Migratory Birds (general)

Various (MBTA-protected)MBTA / BGEPATiming varies — confirm with the local office
JFMAMJJASOND
Survey window
General nesting season ~Mar 15 – Sep 15 (varies by region/species)
Method
Pre-construction nest / clearance survey
Agency / protocol
USFWSMigratory Bird Treaty Act — general nesting-season avoidance
Region
Nationwide
Clearance / restriction window
Avoid vegetation removal ~Mar 15 – Sep 15; if unavoidable, a nest-clearance survey is required

The Mar 15–Sep 15 window is a widely-used regional recommendation, NOT a single federal date. Actual nesting windows shift by latitude, elevation, and species — confirm with the local USFWS Migratory Bird office / state agency.

Nesting Raptors (general)

Various (MBTA-protected)MBTA / BGEPATiming varies — confirm with the local office
JFMAMJJASOND
Survey window
Breeding season typically Jan/Feb – Aug (species-specific)
Method
Nest-occupancy survey; species-specific buffers
Agency / protocol
USFWS / state agenciesMBTA nesting-season avoidance; species-specific raptor buffers
Region
Nationwide

Many raptors initiate nesting earlier than passerines (some by Jan/Feb). Buffers and timing windows are species- and state-specific — confirm with the local USFWS office and state wildlife agency.

Golden Eagle

Aquila chrysaetosMBTA / BGEPATiming varies — confirm with the local office
JFMAMJJASOND
Survey window
Breeding-season nest occupancy & productivity surveys, ~Jan – Jul
Method
Aerial (helicopter preferred) + ground nest surveys; multiple visits
Agency / protocol
USFWSUSFWS Region 6 Eagle Nest Survey Protocol (wind) / eagle monitoring guidance
Region
Western US (and range)

Survey effort and exact timing depend on project type (wind vs. other) and region; failed nests are monitored at least through ~Apr 1. BGEPA disturbance/take permitting applies. Confirm scope with the local USFWS office.

Coastal California Gnatcatcher

Polioptila californica californicaFederally Threatened
JFMAMJJASOND
Survey window
6 surveys, ≥1 week apart, Mar 15 – Jun 30
Method
Protocol pedestrian survey with taped call playback
Agency / protocol
USFWSCoastal California Gnatcatcher Presence/Absence Survey Protocol (1997)
Region
Coastal southern California (coastal sage scrub)

Six presence/absence surveys at least one week apart between Mar 15 and Jun 30, in suitable coastal sage scrub. A USFWS recovery permit is required to conduct the protocol.

Least Bell's Vireo

Vireo bellii pusillusFederally Endangered
JFMAMJJASOND
Survey window
≥8 surveys, ≥10 days apart, Apr 10 – Jul 31
Method
Protocol riparian pedestrian survey (dawn–~11:00)
Agency / protocol
USFWSSurvey Guidelines for the Least Bell's Vireo
Region
Southern California / Southwest riparian

At least 8 surveys spaced ≥10 days apart between Apr 10 and Jul 31 in suitable riparian habitat. Requires a USFWS recovery permit.

Southwestern Willow Flycatcher

Empidonax traillii extimusFederally Endangered
JFMAMJJASOND
Survey window
5 surveys / 3 periods: May 15–31, Jun 1–24, Jun 25–Jul 17 (≥5 days apart)
Method
Call-playback protocol survey (around dawn)
Agency / protocol
USFWS / USGSSurvey Protocol for the Southwestern Willow Flycatcher (USGS TM 2A-10, 2010)
Region
Southwestern US riparian (AZ, NM, CA, NV, UT, CO, TX)

Five surveys across three periods (1 in P1, 2 in P2, 2 in P3), each ≥5 days apart. Requires a USFWS recovery permit.

Western Yellow-Billed Cuckoo

Coccyzus americanus (Western DPS)Federally ThreatenedTiming varies — confirm with the local office
JFMAMJJASOND
Survey window
≥4 surveys across survey periods ~Jun 15 – Aug 15
Method
Call-playback protocol survey
Agency / protocol
USFWS / USGSSurvey Protocol for the Western DPS of the Yellow-Billed Cuckoo (2015)
Region
Western US riparian

Minimum four survey visits during the breeding-season survey periods (cuckoos arrive mid-June; nesting late June–late July). Confirm exact period boundaries against the current protocol. Requires a USFWS recovery permit.

Marbled Murrelet

Brachyramphus marmoratusFederally ThreatenedTiming varies — confirm with the local office
JFMAMJJASOND
Survey window
Survey season ~Apr 15 – Aug 5 (dawn audio-visual stations)
Method
Dawn audio-visual stations; multi-survey, multi-year
Agency / protocol
USFWS / Pacific Seabird GroupPSG Inland Survey Protocol (Evans Mack et al. 2003; revised 2024)
Region
Pacific NW coastal forests (CA, OR, WA)

Survey 'weeks' run ~Apr 15 through early Aug; surveys start before sunrise. A 2024 revised protocol exists — confirm the number of surveys/years and exact weeks against the current PSG/USFWS version.

Northern Spotted Owl

Strix occidentalis caurinaFederally Threatened
JFMAMJJASOND
Survey window
6 visits/year over 2 years; survey period ~Mar 1 – Aug 31
Method
Nighttime/daytime call-back surveys
Agency / protocol
USFWSProtocol for Surveying Activities That May Impact Northern Spotted Owls (2012)
Region
Pacific NW (CA, OR, WA)

Two-year, six-visits-per-year protocol; initial visits late March/early April. Barred-owl presence complicates detection — coordinate survey design with USFWS.

Western Burrowing Owl

Athene cunicularia hypugaeaState / Other
JFMAMJJASOND
Survey window
Breeding-season: 4 visits; first Feb 15 – Apr 15, then ≥3 visits ≥3 weeks apart
Method
Habitat assessment + focused breeding-season surveys
Agency / protocol
CDFW (California)CDFW Staff Report on Burrowing Owl Mitigation (2012)
Region
California (and western US; check state protocol)
Clearance / restriction window
Breeding season Feb 1 – Aug 31 (75 m buffer); non-breeding Sep 1 – Jan 31 (50 m buffer)

California-specific (CDFW). Burrowing owl is a state Species of Special Concern and MBTA-protected, not federally listed. Other states use their own protocols — confirm locally.

Greater Sage-Grouse

Centrocercus urophasianusState / OtherTiming varies — confirm with the local office
JFMAMJJASOND
Survey window
Lek counts: ≥3 counts/lek at ~weekly intervals, ~Mar 15 – Apr 30 (peak ~mid-Apr)
Method
Dawn lek counts
Agency / protocol
WAFWA / state wildlife agenciesGreater Sage-Grouse Range-Wide Population Monitoring Guidelines (WAFWA)
Region
Western US sagebrush (11 states)

Lek-count windows vary by state and elevation (generally Mar 15–Apr 30; peak male attendance ~mid-April). Not federally listed. Each state wildlife agency sets specific dates — confirm locally.

California Red-Legged Frog

Rana draytoniiFederally ThreatenedTiming varies — confirm with the local office
JFMAMJJASONDtiming follows site conditions
Survey window
Multiple day + night surveys; timing per USFWS guidance — varies, confirm with FO
Method
Day + nighttime visual-encounter surveys; site assessment first
Agency / protocol
USFWSRevised Guidance on Site Assessment and Field Surveys for the California Red-Legged Frog (2005)
Region
California (and Baja); coastal & Central Valley

Protocol requires a site assessment, then a set number of day and night surveys (air temp ≥ ~50°F). Exact survey timing is set in coordination with the local USFWS Field Office — confirm. Requires a recovery permit.

Mojave Desert Tortoise

Gopherus agassiziiFederally Threatened
JFMAMJJASOND
Survey window
Conduct when tortoises most active: Apr–May or Sep–Oct
Method
Pedestrian transect surveys; clearance = 2 perpendicular passes
Agency / protocol
USFWSPre-Project & Clearance Survey Protocols for the Mojave Desert Tortoise (Rev. 2019)
Region
Mojave Desert (CA, NV, AZ, UT west of the Colorado River)

Surveys conducted during peak surface activity (spring Apr–May, fall Sep–Oct). Pre-project and clearance protocols are separate documents — use the correct one. An authorized handler is required for clearance.

Gopher Tortoise

Gopherus polyphemusFederally ThreatenedTiming varies — confirm with the local office
JFMAMJJASOND
Survey window
Warm/active season ~Apr – Oct (burrow surveys + scoping)
Method
Line-transect distance sampling or 100% burrow survey with burrow-camera scoping
Agency / protocol
USFWS / state agenciesGopher Tortoise Survey Handbook (LTDS); USFWS Burrow Survey Protocol (2025)
Region
Southeastern US (FL, GA, AL, SC, MS, LA — western population listed)

The western population is federally threatened; the eastern population's status differs by state. Surveys are best done in warm active months (~Apr–Oct). State relocation permitting (e.g. FWC) has its own rules — confirm with the state agency.

Vernal Pool Fairy/Tadpole Shrimp (large branchiopods)

Branchinecta lynchi, Lepidurus packardi, et al.Federally EndangeredTiming varies — confirm with the local office
JFMAMJJASONDtiming follows site conditions
Survey window
One wet-season + one dry-season survey within a 3-year period (follows pool hydrology)
Method
Wet-season aquatic dip-net sampling + dry-season cyst/soil sampling
Agency / protocol
USFWSSurvey Guidelines for the Listed Large Branchiopods (2017)
Region
California & southern Oregon vernal pools

A complete protocol survey is one wet-season + one dry-season survey (or two wet-season) within 3 years; wet-season timing depends on when pools inundate (typically winter–spring rains). Requires a USFWS recovery permit.

Preble's Meadow Jumping Mouse

Zapus hudsonius prebleiFederally ThreatenedTiming varies — confirm with the local office
JFMAMJJASOND
Survey window
Live-trapping during active season (~Jun – Sep)
Method
Sherman live-trapping, parallel transects
Agency / protocol
USFWSPreble's Meadow Jumping Mouse Survey Guidelines (2004)
Region
Colorado Front Range & SE Wyoming riparian

Roughly 400–1,000 trap-nights (≈750 typical) during the active season when the mouse is above ground (it hibernates ~Oct–May). Exact trapping dates are set with the local USFWS office. Requires a recovery permit.

Survey-window FAQ

When can I survey for Indiana bats and northern long-eared bats?

The USFWS Range-Wide Indiana Bat & Northern Long-Eared Bat Survey Guidelines set the summer survey season as May 15–August 15 for both mist-net and acoustic surveys. Tree-clearing restriction windows are set by the local Field Office. Note the northern long-eared bat was reclassified to endangered effective March 31, 2023, removing its former 4(d) exemptions.

What is the general bird nesting season for MBTA compliance?

A widely-used regional rule of thumb is roughly March 15–September 15, but this is not a single federal date — nesting windows shift with latitude, elevation, and species, and many raptors begin earlier (Jan/Feb). Confirm the applicable window with the local USFWS Migratory Bird office or state wildlife agency before clearing vegetation.

When can desert tortoise clearance surveys be done?

USFWS protocols call for conducting Mojave desert tortoise surveys when tortoises are most active above ground — generally spring (April–May) and fall (September–October). Pre-project and clearance surveys are separate protocols, and an authorized handler is required for clearance.

Do survey windows change?

Yes. Survey windows, protocol versions, and tree-clearing dates change frequently and vary by year, region, weather, and the individual agency Field Office. This reference is a quick starting point, not regulatory advice — the official agency protocol always governs, and most listed-species protocol surveys also require a federal and/or state recovery permit.

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